Methods for aggregating ranked lists, especially lists of genes. It implements the Robust Rank Aggregation Kolde et al (2012) <doi:10.1093/bioinformatics/btr709> and some other simple algorithms for the task. RRA method uses a probabilistic model for aggregation that is robust to noise and also facilitates the calculation of significance probabilities for all the elements in the final ranking.
Version: | 1.2.1 |
Depends: | methods |
Published: | 2022-10-03 |
DOI: | 10.32614/CRAN.package.RobustRankAggreg |
Author: | Raivo Kolde [aut, cre], Sven Laur [ctb] |
Maintainer: | Raivo Kolde <rkolde at gmail.com> |
License: | GPL-2 |
NeedsCompilation: | no |
In views: | MetaAnalysis, Omics |
CRAN checks: | RobustRankAggreg results |
Reference manual: | RobustRankAggreg.pdf |
Package source: | RobustRankAggreg_1.2.1.tar.gz |
Windows binaries: | r-devel: RobustRankAggreg_1.2.1.zip, r-release: RobustRankAggreg_1.2.1.zip, r-oldrel: RobustRankAggreg_1.2.1.zip |
macOS binaries: | r-release (arm64): RobustRankAggreg_1.2.1.tgz, r-oldrel (arm64): RobustRankAggreg_1.2.1.tgz, r-release (x86_64): RobustRankAggreg_1.2.1.tgz, r-oldrel (x86_64): RobustRankAggreg_1.2.1.tgz |
Old sources: | RobustRankAggreg archive |
Reverse imports: | gCrisprTools, methylGSA, RCPA |
Reverse suggests: | mastR |
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