Functions for identification of putative causal loci in whole-genome sequencing data. The functions allow genome-wide association scan. It also includes an efficient knockoff generator for genetic data.
| Version: | 0.3.0 |
| Depends: | R (≥ 3.5.0), Matrix, seqminer, bigmemory |
| Imports: | CompQuadForm, data.table, SPAtest, irlba |
| Published: | 2021-11-19 |
| DOI: | 10.32614/CRAN.package.KnockoffScreen |
| Author: | Zihuai He |
| Maintainer: | Zihuai He <zihuai at stanford.edu> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| CRAN checks: | KnockoffScreen results |
| Reference manual: | KnockoffScreen.pdf |
| Package source: | KnockoffScreen_0.3.0.tar.gz |
| Windows binaries: | r-devel: KnockoffScreen_0.3.0.zip, r-release: KnockoffScreen_0.3.0.zip, r-oldrel: KnockoffScreen_0.3.0.zip |
| macOS binaries: | r-release (arm64): KnockoffScreen_0.3.0.tgz, r-oldrel (arm64): KnockoffScreen_0.3.0.tgz, r-release (x86_64): KnockoffScreen_0.3.0.tgz, r-oldrel (x86_64): KnockoffScreen_0.3.0.tgz |
| Old sources: | KnockoffScreen archive |
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