CRAN Package Check Results for Maintainer Hugo Pedder <hugopedder at gmail.com>

CRAN Package Check Results for Maintainer ‘Hugo Pedder <hugopedder at gmail.com>’

Last updated on 2024-11-08 00:49:57 CET.

Package	ERROR	OK
MBNMAdose	9	4
MBNMAtime	9	4

Package MBNMAdose

Current CRAN status: ERROR: 9, OK: 4

Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png 1344x960 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 23944 bytes Input file size = 24826 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20046 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20034 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18621 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18530 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18530 Output IDAT size = 18530 bytes (5414 bytes decrease) Output file size = 18608 bytes (6218 bytes = 25.05% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 218046 bytes Input file size = 218436 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 Output IDAT size = 160681 bytes (57365 bytes decrease) Output file size = 160759 bytes (57677 bytes = 26.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 144160 bytes Input file size = 144442 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 Output IDAT size = 108770 bytes (35390 bytes decrease) Output file size = 108848 bytes (35594 bytes = 24.64% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 43024 bytes Input file size = 43162 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 Output IDAT size = 34497 bytes (8527 bytes decrease) Output file size = 34575 bytes (8587 bytes = 19.89% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34591 bytes Input file size = 34717 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 Output IDAT size = 28108 bytes (6483 bytes decrease) Output file size = 28186 bytes (6531 bytes = 18.81% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 157316 bytes Input file size = 157622 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 Output IDAT size = 120267 bytes (37049 bytes decrease) Output file size = 120345 bytes (37277 bytes = 23.65% decrease) Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmadose-overview.Rmd’ --- re-building ‘metaregression-6.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 73801 bytes Input file size = 73987 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68348 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66764 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66764 Output IDAT size = 66764 bytes (7037 bytes decrease) Output file size = 66842 bytes (7145 bytes = 9.66% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 84210 bytes Input file size = 84408 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73335 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73335 Output IDAT size = 73335 bytes (10875 bytes decrease) Output file size = 73413 bytes (10995 bytes = 13.03% decrease) --- finished re-building ‘metaregression-6.Rmd’ --- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16137 bytes Input file size = 16227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 Output IDAT size = 13294 bytes (2843 bytes decrease) Output file size = 13372 bytes (2855 bytes = 17.59% decrease) Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘nma_in_mbnmadose.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 62978 bytes Input file size = 63140 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57423 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 56918 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 56918 Output IDAT size = 56918 bytes (6060 bytes decrease) Output file size = 56996 bytes (6144 bytes = 9.73% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 65588 bytes Input file size = 65762 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57238 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57238 Output IDAT size = 57238 bytes (8350 bytes decrease) Output file size = 57316 bytes (8446 bytes = 12.84% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 59822 bytes Input file size = 59984 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53677 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53677 Output IDAT size = 53677 bytes (6145 bytes decrease) Output file size = 53755 bytes (6229 bytes = 10.38% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 115401 bytes Input file size = 115647 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95020 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95020 Output IDAT size = 95020 bytes (20381 bytes decrease) Output file size = 95098 bytes (20549 bytes = 17.77% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 100872 bytes Input file size = 101094 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85439 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85439 Output IDAT size = 85439 bytes (15433 bytes decrease) Output file size = 85517 bytes (15577 bytes = 15.41% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 128109 bytes Input file size = 128367 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103343 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103343 Output IDAT size = 103343 bytes (24766 bytes decrease) Output file size = 103421 bytes (24946 bytes = 19.43% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 47478 bytes Input file size = 47616 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 43438 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 43438 Output IDAT size = 43438 bytes (4040 bytes decrease) Output file size = 43516 bytes (4100 bytes = 8.61% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 129062 bytes Input file size = 129320 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99273 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99273 Output IDAT size = 99273 bytes (29789 bytes decrease) Output file size = 99351 bytes (29969 bytes = 23.17% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 101206 bytes Input file size = 101428 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 Output IDAT size = 78412 bytes (22794 bytes decrease) Output file size = 78490 bytes (22938 bytes = 22.62% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33742 bytes Input file size = 33868 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 Output IDAT size = 26932 bytes (6810 bytes decrease) Output file size = 27010 bytes (6858 bytes = 20.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34220 bytes Input file size = 34346 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 Output IDAT size = 28128 bytes (6092 bytes decrease) Output file size = 28206 bytes (6140 bytes = 17.88% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31005 bytes Input file size = 31119 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 Output IDAT size = 25151 bytes (5854 bytes decrease) Output file size = 25229 bytes (5890 bytes = 18.93% decrease) Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmadose-2.Rmd’ SUMMARY: processing the following files failed: ‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png 1344x960 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 23899 bytes Input file size = 24781 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19914 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19876 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18186 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18095 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18095 Output IDAT size = 18095 bytes (5804 bytes decrease) Output file size = 18173 bytes (6608 bytes = 26.67% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 218046 bytes Input file size = 218436 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 Output IDAT size = 160681 bytes (57365 bytes decrease) Output file size = 160759 bytes (57677 bytes = 26.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 144160 bytes Input file size = 144442 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 Output IDAT size = 108770 bytes (35390 bytes decrease) Output file size = 108848 bytes (35594 bytes = 24.64% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 43024 bytes Input file size = 43162 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 Output IDAT size = 34497 bytes (8527 bytes decrease) Output file size = 34575 bytes (8587 bytes = 19.89% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34591 bytes Input file size = 34717 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 Output IDAT size = 28108 bytes (6483 bytes decrease) Output file size = 28186 bytes (6531 bytes = 18.81% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 157316 bytes Input file size = 157622 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 Output IDAT size = 120267 bytes (37049 bytes decrease) Output file size = 120345 bytes (37277 bytes = 23.65% decrease) Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmadose-overview.Rmd’ --- re-building ‘metaregression-6.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 73710 bytes Input file size = 73884 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68146 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66715 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66715 Output IDAT size = 66715 bytes (6995 bytes decrease) Output file size = 66793 bytes (7091 bytes = 9.60% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 82519 bytes Input file size = 82717 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71958 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71958 Output IDAT size = 71958 bytes (10561 bytes decrease) Output file size = 72036 bytes (10681 bytes = 12.91% decrease) --- finished re-building ‘metaregression-6.Rmd’ --- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16137 bytes Input file size = 16227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 Output IDAT size = 13294 bytes (2843 bytes decrease) Output file size = 13372 bytes (2855 bytes = 17.59% decrease) Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘nma_in_mbnmadose.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 60373 bytes Input file size = 60535 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 55934 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54513 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54513 Output IDAT size = 54513 bytes (5860 bytes decrease) Output file size = 54591 bytes (5944 bytes = 9.82% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 65608 bytes Input file size = 65782 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56977 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56977 Output IDAT size = 56977 bytes (8631 bytes decrease) Output file size = 57055 bytes (8727 bytes = 13.27% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 65881 bytes Input file size = 66055 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57367 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57367 Output IDAT size = 57367 bytes (8514 bytes decrease) Output file size = 57445 bytes (8610 bytes = 13.03% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 113252 bytes Input file size = 113486 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93666 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93666 Output IDAT size = 93666 bytes (19586 bytes decrease) Output file size = 93744 bytes (19742 bytes = 17.40% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 100846 bytes Input file size = 101068 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85976 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85976 Output IDAT size = 85976 bytes (14870 bytes decrease) Output file size = 86054 bytes (15014 bytes = 14.86% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 128645 bytes Input file size = 128903 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104460 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104460 Output IDAT size = 104460 bytes (24185 bytes decrease) Output file size = 104538 bytes (24365 bytes = 18.90% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 46849 bytes Input file size = 46987 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42852 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42852 Output IDAT size = 42852 bytes (3997 bytes decrease) Output file size = 42930 bytes (4057 bytes = 8.63% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 129012 bytes Input file size = 129270 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99250 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99250 Output IDAT size = 99250 bytes (29762 bytes decrease) Output file size = 99328 bytes (29942 bytes = 23.16% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 101206 bytes Input file size = 101428 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 Output IDAT size = 78412 bytes (22794 bytes decrease) Output file size = 78490 bytes (22938 bytes = 22.62% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33742 bytes Input file size = 33868 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 Output IDAT size = 26932 bytes (6810 bytes decrease) Output file size = 27010 bytes (6858 bytes = 20.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34220 bytes Input file size = 34346 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 Output IDAT size = 28128 bytes (6092 bytes decrease) Output file size = 28206 bytes (6140 bytes = 17.88% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31005 bytes Input file size = 31119 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 Output IDAT size = 25151 bytes (5854 bytes decrease) Output file size = 25229 bytes (5890 bytes = 18.93% decrease) Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmadose-2.Rmd’ SUMMARY: processing the following files failed: ‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png 1344x960 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 25450 bytes Input file size = 26344 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21605 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 21593 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 20744 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20591 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20591 Output IDAT size = 20591 bytes (4859 bytes decrease) Output file size = 20669 bytes (5675 bytes = 21.54% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 218046 bytes Input file size = 218436 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 Output IDAT size = 160681 bytes (57365 bytes decrease) Output file size = 160759 bytes (57677 bytes = 26.40% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 144160 bytes Input file size = 144442 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 Output IDAT size = 108770 bytes (35390 bytes decrease) Output file size = 108848 bytes (35594 bytes = 24.64% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 43024 bytes Input file size = 43162 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 Output IDAT size = 34497 bytes (8527 bytes decrease) Output file size = 34575 bytes (8587 bytes = 19.89% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34591 bytes Input file size = 34717 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 Output IDAT size = 28108 bytes (6483 bytes decrease) Output file size = 28186 bytes (6531 bytes = 18.81% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 157316 bytes Input file size = 157622 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 Output IDAT size = 120267 bytes (37049 bytes decrease) Output file size = 120345 bytes (37277 bytes = 23.65% decrease) Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmadose-overview.Rmd’ --- re-building ‘metaregression-6.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 73739 bytes Input file size = 73925 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68368 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66730 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66730 Output IDAT size = 66730 bytes (7009 bytes decrease) Output file size = 66808 bytes (7117 bytes = 9.63% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 82295 bytes Input file size = 82493 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71794 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71794 Output IDAT size = 71794 bytes (10501 bytes decrease) Output file size = 71872 bytes (10621 bytes = 12.88% decrease) --- finished re-building ‘metaregression-6.Rmd’ --- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16137 bytes Input file size = 16227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 Output IDAT size = 13294 bytes (2843 bytes decrease) Output file size = 13372 bytes (2855 bytes = 17.59% decrease) Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘nma_in_mbnmadose.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 61624 bytes Input file size = 61786 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57047 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55706 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55706 Output IDAT size = 55706 bytes (5918 bytes decrease) Output file size = 55784 bytes (6002 bytes = 9.71% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 65504 bytes Input file size = 65666 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56979 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56979 Output IDAT size = 56979 bytes (8525 bytes decrease) Output file size = 57057 bytes (8609 bytes = 13.11% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 65341 bytes Input file size = 65503 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57204 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57204 Output IDAT size = 57204 bytes (8137 bytes decrease) Output file size = 57282 bytes (8221 bytes = 12.55% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 112037 bytes Input file size = 112271 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 92358 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 92358 Output IDAT size = 92358 bytes (19679 bytes decrease) Output file size = 92436 bytes (19835 bytes = 17.67% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 100635 bytes Input file size = 100857 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85708 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85708 Output IDAT size = 85708 bytes (14927 bytes decrease) Output file size = 85786 bytes (15071 bytes = 14.94% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 128213 bytes Input file size = 128471 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103646 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103646 Output IDAT size = 103646 bytes (24567 bytes decrease) Output file size = 103724 bytes (24747 bytes = 19.26% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 47186 bytes Input file size = 47324 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 43244 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 43244 Output IDAT size = 43244 bytes (3942 bytes decrease) Output file size = 43322 bytes (4002 bytes = 8.46% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 129099 bytes Input file size = 129357 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99231 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99231 Output IDAT size = 99231 bytes (29868 bytes decrease) Output file size = 99309 bytes (30048 bytes = 23.23% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 101206 bytes Input file size = 101428 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 Output IDAT size = 78412 bytes (22794 bytes decrease) Output file size = 78490 bytes (22938 bytes = 22.62% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33742 bytes Input file size = 33868 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 Output IDAT size = 26932 bytes (6810 bytes decrease) Output file size = 27010 bytes (6858 bytes = 20.25% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34220 bytes Input file size = 34346 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 Output IDAT size = 28128 bytes (6092 bytes decrease) Output file size = 28206 bytes (6140 bytes = 17.88% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31005 bytes Input file size = 31119 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 Output IDAT size = 25151 bytes (5854 bytes decrease) Output file size = 25229 bytes (5890 bytes = 18.93% decrease) Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmadose-2.Rmd’ SUMMARY: processing the following files failed: ‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png 1344x960 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 24189 bytes Input file size = 25071 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20295 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20284 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 19105 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19051 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19051 Output IDAT size = 19051 bytes (5138 bytes decrease) Output file size = 19129 bytes (5942 bytes = 23.70% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 218046 bytes Input file size = 218436 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 Output IDAT size = 160681 bytes (57365 bytes decrease) Output file size = 160759 bytes (57677 bytes = 26.40% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 144160 bytes Input file size = 144442 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 Output IDAT size = 108770 bytes (35390 bytes decrease) Output file size = 108848 bytes (35594 bytes = 24.64% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 43024 bytes Input file size = 43162 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 Output IDAT size = 34497 bytes (8527 bytes decrease) Output file size = 34575 bytes (8587 bytes = 19.89% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34591 bytes Input file size = 34717 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 Output IDAT size = 28108 bytes (6483 bytes decrease) Output file size = 28186 bytes (6531 bytes = 18.81% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 157316 bytes Input file size = 157622 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 Output IDAT size = 120267 bytes (37049 bytes decrease) Output file size = 120345 bytes (37277 bytes = 23.65% decrease) Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmadose-overview.Rmd’ --- re-building ‘metaregression-6.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 73700 bytes Input file size = 73874 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68245 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66685 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66685 Output IDAT size = 66685 bytes (7015 bytes decrease) Output file size = 66763 bytes (7111 bytes = 9.63% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 82435 bytes Input file size = 82633 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71981 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71981 Output IDAT size = 71981 bytes (10454 bytes decrease) Output file size = 72059 bytes (10574 bytes = 12.80% decrease) --- finished re-building ‘metaregression-6.Rmd’ --- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16137 bytes Input file size = 16227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 Output IDAT size = 13294 bytes (2843 bytes decrease) Output file size = 13372 bytes (2855 bytes = 17.59% decrease) Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘nma_in_mbnmadose.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 61505 bytes Input file size = 61667 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56514 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55573 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55573 Output IDAT size = 55573 bytes (5932 bytes decrease) Output file size = 55651 bytes (6016 bytes = 9.76% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 65670 bytes Input file size = 65844 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56865 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56865 Output IDAT size = 56865 bytes (8805 bytes decrease) Output file size = 56943 bytes (8901 bytes = 13.52% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 59684 bytes Input file size = 59846 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53323 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53323 Output IDAT size = 53323 bytes (6361 bytes decrease) Output file size = 53401 bytes (6445 bytes = 10.77% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 115404 bytes Input file size = 115650 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95324 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95324 Output IDAT size = 95324 bytes (20080 bytes decrease) Output file size = 95402 bytes (20248 bytes = 17.51% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 100494 bytes Input file size = 100716 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85671 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85671 Output IDAT size = 85671 bytes (14823 bytes decrease) Output file size = 85749 bytes (14967 bytes = 14.86% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 128605 bytes Input file size = 128863 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104245 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104245 Output IDAT size = 104245 bytes (24360 bytes decrease) Output file size = 104323 bytes (24540 bytes = 19.04% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 46811 bytes Input file size = 46949 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42883 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42883 Output IDAT size = 42883 bytes (3928 bytes decrease) Output file size = 42961 bytes (3988 bytes = 8.49% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 129193 bytes Input file size = 129451 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99255 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99255 Output IDAT size = 99255 bytes (29938 bytes decrease) Output file size = 99333 bytes (30118 bytes = 23.27% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 101206 bytes Input file size = 101428 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 Output IDAT size = 78412 bytes (22794 bytes decrease) Output file size = 78490 bytes (22938 bytes = 22.62% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33742 bytes Input file size = 33868 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 Output IDAT size = 26932 bytes (6810 bytes decrease) Output file size = 27010 bytes (6858 bytes = 20.25% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34220 bytes Input file size = 34346 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 Output IDAT size = 28128 bytes (6092 bytes decrease) Output file size = 28206 bytes (6140 bytes = 17.88% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31005 bytes Input file size = 31119 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 Output IDAT size = 25151 bytes (5854 bytes decrease) Output file size = 25229 bytes (5890 bytes = 18.93% decrease) Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmadose-2.Rmd’ SUMMARY: processing the following files failed: ‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'consistencychecking-3.Rmd' using rmarkdown --- finished re-building 'consistencychecking-3.Rmd' --- re-building 'dataexploration-1.Rmd' using rmarkdown Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building 'dataexploration-1.Rmd' --- re-building 'mbnmadose-overview.Rmd' using rmarkdown --- finished re-building 'mbnmadose-overview.Rmd' --- re-building 'metaregression-6.Rmd' using rmarkdown --- finished re-building 'metaregression-6.Rmd' --- re-building 'nma_in_mbnmadose.Rmd' using rmarkdown Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building 'nma_in_mbnmadose.Rmd' --- re-building 'outputs-4.Rmd' using rmarkdown --- finished re-building 'outputs-4.Rmd' --- re-building 'predictions-5.Rmd' using rmarkdown --- finished re-building 'predictions-5.Rmd' --- re-building 'runmbnmadose-2.Rmd' using rmarkdown Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building 'runmbnmadose-2.Rmd' SUMMARY: processing the following files failed: 'dataexploration-1.Rmd' 'nma_in_mbnmadose.Rmd' 'runmbnmadose-2.Rmd' Error: Vignette re-building failed. Execution halted Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png 1344x960 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 23729 bytes Input file size = 24611 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19978 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19965 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18640 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18567 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18567 Output IDAT size = 18567 bytes (5162 bytes decrease) Output file size = 18645 bytes (5966 bytes = 24.24% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 218046 bytes Input file size = 218436 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 Output IDAT size = 160681 bytes (57365 bytes decrease) Output file size = 160759 bytes (57677 bytes = 26.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 144160 bytes Input file size = 144442 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 Output IDAT size = 108770 bytes (35390 bytes decrease) Output file size = 108848 bytes (35594 bytes = 24.64% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 43024 bytes Input file size = 43162 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 Output IDAT size = 34497 bytes (8527 bytes decrease) Output file size = 34575 bytes (8587 bytes = 19.89% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34591 bytes Input file size = 34717 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 Output IDAT size = 28108 bytes (6483 bytes decrease) Output file size = 28186 bytes (6531 bytes = 18.81% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 157316 bytes Input file size = 157622 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 Output IDAT size = 120267 bytes (37049 bytes decrease) Output file size = 120345 bytes (37277 bytes = 23.65% decrease) Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmadose-overview.Rmd’ --- re-building ‘metaregression-6.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 73798 bytes Input file size = 73984 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68361 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66715 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66715 Output IDAT size = 66715 bytes (7083 bytes decrease) Output file size = 66793 bytes (7191 bytes = 9.72% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 83991 bytes Input file size = 84189 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72785 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72785 Output IDAT size = 72785 bytes (11206 bytes decrease) Output file size = 72863 bytes (11326 bytes = 13.45% decrease) --- finished re-building ‘metaregression-6.Rmd’ --- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16137 bytes Input file size = 16227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 Output IDAT size = 13294 bytes (2843 bytes decrease) Output file size = 13372 bytes (2855 bytes = 17.59% decrease) Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘nma_in_mbnmadose.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 60198 bytes Input file size = 60360 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56187 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54370 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54370 Output IDAT size = 54370 bytes (5828 bytes decrease) Output file size = 54448 bytes (5912 bytes = 9.79% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 60675 bytes Input file size = 60837 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53674 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53674 Output IDAT size = 53674 bytes (7001 bytes decrease) Output file size = 53752 bytes (7085 bytes = 11.65% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 59784 bytes Input file size = 59946 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53464 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53464 Output IDAT size = 53464 bytes (6320 bytes decrease) Output file size = 53542 bytes (6404 bytes = 10.68% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 116576 bytes Input file size = 116822 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97083 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97083 Output IDAT size = 97083 bytes (19493 bytes decrease) Output file size = 97161 bytes (19661 bytes = 16.83% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 100875 bytes Input file size = 101097 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85956 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85956 Output IDAT size = 85956 bytes (14919 bytes decrease) Output file size = 86034 bytes (15063 bytes = 14.90% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 128306 bytes Input file size = 128564 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104129 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104129 Output IDAT size = 104129 bytes (24177 bytes decrease) Output file size = 104207 bytes (24357 bytes = 18.95% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 46975 bytes Input file size = 47113 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42953 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42953 Output IDAT size = 42953 bytes (4022 bytes decrease) Output file size = 43031 bytes (4082 bytes = 8.66% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 129148 bytes Input file size = 129406 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99260 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99260 Output IDAT size = 99260 bytes (29888 bytes decrease) Output file size = 99338 bytes (30068 bytes = 23.24% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 101206 bytes Input file size = 101428 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 Output IDAT size = 78412 bytes (22794 bytes decrease) Output file size = 78490 bytes (22938 bytes = 22.62% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33742 bytes Input file size = 33868 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 Output IDAT size = 26932 bytes (6810 bytes decrease) Output file size = 27010 bytes (6858 bytes = 20.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34220 bytes Input file size = 34346 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 Output IDAT size = 28128 bytes (6092 bytes decrease) Output file size = 28206 bytes (6140 bytes = 17.88% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31005 bytes Input file size = 31119 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 Output IDAT size = 25151 bytes (5854 bytes decrease) Output file size = 25229 bytes (5890 bytes = 18.93% decrease) Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmadose-2.Rmd’ SUMMARY: processing the following files failed: ‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64

Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png 1344x960 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 25728 bytes Input file size = 26622 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21828 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 21100 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20884 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20884 Output IDAT size = 20884 bytes (4844 bytes decrease) Output file size = 20962 bytes (5660 bytes = 21.26% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 218046 bytes Input file size = 218436 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681 Output IDAT size = 160681 bytes (57365 bytes decrease) Output file size = 160759 bytes (57677 bytes = 26.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 144160 bytes Input file size = 144442 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770 Output IDAT size = 108770 bytes (35390 bytes decrease) Output file size = 108848 bytes (35594 bytes = 24.64% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 43024 bytes Input file size = 43162 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497 Output IDAT size = 34497 bytes (8527 bytes decrease) Output file size = 34575 bytes (8587 bytes = 19.89% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34591 bytes Input file size = 34717 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108 Output IDAT size = 28108 bytes (6483 bytes decrease) Output file size = 28186 bytes (6531 bytes = 18.81% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 157316 bytes Input file size = 157622 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267 Output IDAT size = 120267 bytes (37049 bytes decrease) Output file size = 120345 bytes (37277 bytes = 23.65% decrease) Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmadose-overview.Rmd’ --- re-building ‘metaregression-6.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 73782 bytes Input file size = 73968 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68399 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66820 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66820 Output IDAT size = 66820 bytes (6962 bytes decrease) Output file size = 66898 bytes (7070 bytes = 9.56% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 82476 bytes Input file size = 82674 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71899 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71899 Output IDAT size = 71899 bytes (10577 bytes decrease) Output file size = 71977 bytes (10697 bytes = 12.94% decrease) --- finished re-building ‘metaregression-6.Rmd’ --- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16137 bytes Input file size = 16227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294 Output IDAT size = 13294 bytes (2843 bytes decrease) Output file size = 13372 bytes (2855 bytes = 17.59% decrease) Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘nma_in_mbnmadose.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 61483 bytes Input file size = 61645 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56650 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55568 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55568 Output IDAT size = 55568 bytes (5915 bytes decrease) Output file size = 55646 bytes (5999 bytes = 9.73% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 65539 bytes Input file size = 65713 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57137 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57137 Output IDAT size = 57137 bytes (8402 bytes decrease) Output file size = 57215 bytes (8498 bytes = 12.93% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 60720 bytes Input file size = 60882 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53908 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53908 Output IDAT size = 53908 bytes (6812 bytes decrease) Output file size = 53986 bytes (6896 bytes = 11.33% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 116170 bytes Input file size = 116416 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 96013 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 96013 Output IDAT size = 96013 bytes (20157 bytes decrease) Output file size = 96091 bytes (20325 bytes = 17.46% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 100370 bytes Input file size = 100592 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85555 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85555 Output IDAT size = 85555 bytes (14815 bytes decrease) Output file size = 85633 bytes (14959 bytes = 14.87% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 127510 bytes Input file size = 127768 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103345 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103345 Output IDAT size = 103345 bytes (24165 bytes decrease) Output file size = 103423 bytes (24345 bytes = 19.05% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 46653 bytes Input file size = 46791 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42660 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42660 Output IDAT size = 42660 bytes (3993 bytes decrease) Output file size = 42738 bytes (4053 bytes = 8.66% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 129057 bytes Input file size = 129315 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99276 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99276 Output IDAT size = 99276 bytes (29781 bytes decrease) Output file size = 99354 bytes (29961 bytes = 23.17% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 101206 bytes Input file size = 101428 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412 Output IDAT size = 78412 bytes (22794 bytes decrease) Output file size = 78490 bytes (22938 bytes = 22.62% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33742 bytes Input file size = 33868 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932 Output IDAT size = 26932 bytes (6810 bytes decrease) Output file size = 27010 bytes (6858 bytes = 20.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 34220 bytes Input file size = 34346 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128 Output IDAT size = 28128 bytes (6092 bytes decrease) Output file size = 28206 bytes (6140 bytes = 17.88% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31005 bytes Input file size = 31119 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151 Output IDAT size = 25151 bytes (5854 bytes decrease) Output file size = 25229 bytes (5890 bytes = 18.93% decrease) Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmadose-2.Rmd’ SUMMARY: processing the following files failed: ‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

Package MBNMAtime

Current CRAN status: ERROR: 9, OK: 4

Additional issues

noSuggests

Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19052 bytes Input file size = 19154 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 Output IDAT size = 14912 bytes (4140 bytes decrease) Output file size = 14990 bytes (4164 bytes = 21.74% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33676 bytes Input file size = 33802 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 Output IDAT size = 26019 bytes (7657 bytes decrease) Output file size = 26097 bytes (7705 bytes = 22.79% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31267 bytes Input file size = 31381 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 Output IDAT size = 25404 bytes (5863 bytes decrease) Output file size = 25482 bytes (5899 bytes = 18.80% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19072 bytes Input file size = 19174 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 Output IDAT size = 16320 bytes (2752 bytes decrease) Output file size = 16398 bytes (2776 bytes = 14.48% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 119981 bytes Input file size = 120227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 Output IDAT size = 88771 bytes (31210 bytes decrease) Output file size = 88849 bytes (31378 bytes = 26.10% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25739 bytes Input file size = 25853 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 Output IDAT size = 19919 bytes (5820 bytes decrease) Output file size = 19997 bytes (5856 bytes = 22.65% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 131032 bytes Input file size = 131290 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 Output IDAT size = 94428 bytes (36604 bytes decrease) Output file size = 94506 bytes (36784 bytes = 28.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 79747 bytes Input file size = 79933 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 Output IDAT size = 57953 bytes (21794 bytes decrease) Output file size = 58031 bytes (21902 bytes = 27.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 64122 bytes Input file size = 64284 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 Output IDAT size = 45061 bytes (19061 bytes decrease) Output file size = 45139 bytes (19145 bytes = 29.78% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 88380 bytes Input file size = 88578 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66016 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66016 Output IDAT size = 66016 bytes (22364 bytes decrease) Output file size = 66094 bytes (22484 bytes = 25.38% decrease) --- finished re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmatime-overview.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 91699 bytes Input file size = 91909 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66576 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66576 Output IDAT size = 66576 bytes (25123 bytes decrease) Output file size = 66654 bytes (25255 bytes = 27.48% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19214 bytes Input file size = 19316 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16492 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16492 Output IDAT size = 16492 bytes (2722 bytes decrease) Output file size = 16570 bytes (2746 bytes = 14.22% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 62452 bytes Input file size = 62614 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45213 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45213 Output IDAT size = 45213 bytes (17239 bytes decrease) Output file size = 45291 bytes (17323 bytes = 27.67% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 81609 bytes Input file size = 81795 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61894 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61894 Output IDAT size = 61894 bytes (19715 bytes decrease) Output file size = 61972 bytes (19823 bytes = 24.23% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 67145 bytes Input file size = 67319 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53309 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53309 Output IDAT size = 53309 bytes (13836 bytes decrease) Output file size = 53387 bytes (13932 bytes = 20.70% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31393 bytes Input file size = 31507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24346 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24346 Output IDAT size = 24346 bytes (7047 bytes decrease) Output file size = 24424 bytes (7083 bytes = 22.48% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 75306 bytes Input file size = 75492 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58332 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58332 Output IDAT size = 58332 bytes (16974 bytes decrease) Output file size = 58410 bytes (17082 bytes = 22.63% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 52653 bytes Input file size = 52803 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39668 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39668 Output IDAT size = 39668 bytes (12985 bytes decrease) Output file size = 39746 bytes (13057 bytes = 24.73% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd) Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmatime-2.Rmd’ SUMMARY: processing the following file failed: ‘runmbnmatime-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19052 bytes Input file size = 19154 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 Output IDAT size = 14912 bytes (4140 bytes decrease) Output file size = 14990 bytes (4164 bytes = 21.74% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33676 bytes Input file size = 33802 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 Output IDAT size = 26019 bytes (7657 bytes decrease) Output file size = 26097 bytes (7705 bytes = 22.79% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31267 bytes Input file size = 31381 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 Output IDAT size = 25404 bytes (5863 bytes decrease) Output file size = 25482 bytes (5899 bytes = 18.80% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19072 bytes Input file size = 19174 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 Output IDAT size = 16320 bytes (2752 bytes decrease) Output file size = 16398 bytes (2776 bytes = 14.48% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 119981 bytes Input file size = 120227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 Output IDAT size = 88771 bytes (31210 bytes decrease) Output file size = 88849 bytes (31378 bytes = 26.10% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25739 bytes Input file size = 25853 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 Output IDAT size = 19919 bytes (5820 bytes decrease) Output file size = 19997 bytes (5856 bytes = 22.65% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 131032 bytes Input file size = 131290 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 Output IDAT size = 94428 bytes (36604 bytes decrease) Output file size = 94506 bytes (36784 bytes = 28.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 79747 bytes Input file size = 79933 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 Output IDAT size = 57953 bytes (21794 bytes decrease) Output file size = 58031 bytes (21902 bytes = 27.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 64122 bytes Input file size = 64284 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 Output IDAT size = 45061 bytes (19061 bytes decrease) Output file size = 45139 bytes (19145 bytes = 29.78% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 88439 bytes Input file size = 88637 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65438 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65438 Output IDAT size = 65438 bytes (23001 bytes decrease) Output file size = 65516 bytes (23121 bytes = 26.09% decrease) --- finished re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmatime-overview.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 91886 bytes Input file size = 92096 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66315 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66315 Output IDAT size = 66315 bytes (25571 bytes decrease) Output file size = 66393 bytes (25703 bytes = 27.91% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 20201 bytes Input file size = 20303 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17002 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17002 Output IDAT size = 17002 bytes (3199 bytes decrease) Output file size = 17080 bytes (3223 bytes = 15.87% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 60180 bytes Input file size = 60342 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43932 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43932 Output IDAT size = 43932 bytes (16248 bytes decrease) Output file size = 44010 bytes (16332 bytes = 27.07% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 81791 bytes Input file size = 81977 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62067 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62067 Output IDAT size = 62067 bytes (19724 bytes decrease) Output file size = 62145 bytes (19832 bytes = 24.19% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 67052 bytes Input file size = 67226 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52605 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52605 Output IDAT size = 52605 bytes (14447 bytes decrease) Output file size = 52683 bytes (14543 bytes = 21.63% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31295 bytes Input file size = 31409 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24102 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24102 Output IDAT size = 24102 bytes (7193 bytes decrease) Output file size = 24180 bytes (7229 bytes = 23.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 75156 bytes Input file size = 75342 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57975 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57975 Output IDAT size = 57975 bytes (17181 bytes decrease) Output file size = 58053 bytes (17289 bytes = 22.95% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 53875 bytes Input file size = 54025 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40552 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40552 Output IDAT size = 40552 bytes (13323 bytes decrease) Output file size = 40630 bytes (13395 bytes = 24.79% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd) Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmatime-2.Rmd’ SUMMARY: processing the following file failed: ‘runmbnmatime-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19052 bytes Input file size = 19154 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 Output IDAT size = 14912 bytes (4140 bytes decrease) Output file size = 14990 bytes (4164 bytes = 21.74% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33681 bytes Input file size = 33807 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014 Output IDAT size = 26014 bytes (7667 bytes decrease) Output file size = 26092 bytes (7715 bytes = 22.82% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31267 bytes Input file size = 31381 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 Output IDAT size = 25404 bytes (5863 bytes decrease) Output file size = 25482 bytes (5899 bytes = 18.80% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19072 bytes Input file size = 19174 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 Output IDAT size = 16320 bytes (2752 bytes decrease) Output file size = 16398 bytes (2776 bytes = 14.48% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 119981 bytes Input file size = 120227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 Output IDAT size = 88771 bytes (31210 bytes decrease) Output file size = 88849 bytes (31378 bytes = 26.10% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25739 bytes Input file size = 25853 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 Output IDAT size = 19919 bytes (5820 bytes decrease) Output file size = 19997 bytes (5856 bytes = 22.65% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 131032 bytes Input file size = 131290 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 Output IDAT size = 94428 bytes (36604 bytes decrease) Output file size = 94506 bytes (36784 bytes = 28.02% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 79749 bytes Input file size = 79935 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952 Output IDAT size = 57952 bytes (21797 bytes decrease) Output file size = 58030 bytes (21905 bytes = 27.40% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 64122 bytes Input file size = 64284 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 Output IDAT size = 45061 bytes (19061 bytes decrease) Output file size = 45139 bytes (19145 bytes = 29.78% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 88363 bytes Input file size = 88561 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66006 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66006 Output IDAT size = 66006 bytes (22357 bytes decrease) Output file size = 66084 bytes (22477 bytes = 25.38% decrease) --- finished re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmatime-overview.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 91673 bytes Input file size = 91883 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65961 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65961 Output IDAT size = 65961 bytes (25712 bytes decrease) Output file size = 66039 bytes (25844 bytes = 28.13% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 20934 bytes Input file size = 21036 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17544 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17544 Output IDAT size = 17544 bytes (3390 bytes decrease) Output file size = 17622 bytes (3414 bytes = 16.23% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 58168 bytes Input file size = 58330 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42094 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42094 Output IDAT size = 42094 bytes (16074 bytes decrease) Output file size = 42172 bytes (16158 bytes = 27.70% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 81650 bytes Input file size = 81836 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61897 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61897 Output IDAT size = 61897 bytes (19753 bytes decrease) Output file size = 61975 bytes (19861 bytes = 24.27% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 67160 bytes Input file size = 67334 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52648 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52648 Output IDAT size = 52648 bytes (14512 bytes decrease) Output file size = 52726 bytes (14608 bytes = 21.69% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31435 bytes Input file size = 31549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23934 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23934 Output IDAT size = 23934 bytes (7501 bytes decrease) Output file size = 24012 bytes (7537 bytes = 23.89% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 75754 bytes Input file size = 75940 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58741 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58741 Output IDAT size = 58741 bytes (17013 bytes decrease) Output file size = 58819 bytes (17121 bytes = 22.55% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 56444 bytes Input file size = 56594 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42385 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42385 Output IDAT size = 42385 bytes (14059 bytes decrease) Output file size = 42463 bytes (14131 bytes = 24.97% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd) Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmatime-2.Rmd’ SUMMARY: processing the following file failed: ‘runmbnmatime-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19052 bytes Input file size = 19154 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 Output IDAT size = 14912 bytes (4140 bytes decrease) Output file size = 14990 bytes (4164 bytes = 21.74% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33681 bytes Input file size = 33807 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014 Output IDAT size = 26014 bytes (7667 bytes decrease) Output file size = 26092 bytes (7715 bytes = 22.82% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31267 bytes Input file size = 31381 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 Output IDAT size = 25404 bytes (5863 bytes decrease) Output file size = 25482 bytes (5899 bytes = 18.80% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19072 bytes Input file size = 19174 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 Output IDAT size = 16320 bytes (2752 bytes decrease) Output file size = 16398 bytes (2776 bytes = 14.48% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 119981 bytes Input file size = 120227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 Output IDAT size = 88771 bytes (31210 bytes decrease) Output file size = 88849 bytes (31378 bytes = 26.10% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25739 bytes Input file size = 25853 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 Output IDAT size = 19919 bytes (5820 bytes decrease) Output file size = 19997 bytes (5856 bytes = 22.65% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 131032 bytes Input file size = 131290 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 Output IDAT size = 94428 bytes (36604 bytes decrease) Output file size = 94506 bytes (36784 bytes = 28.02% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 79749 bytes Input file size = 79935 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952 Output IDAT size = 57952 bytes (21797 bytes decrease) Output file size = 58030 bytes (21905 bytes = 27.40% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 64122 bytes Input file size = 64284 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 Output IDAT size = 45061 bytes (19061 bytes decrease) Output file size = 45139 bytes (19145 bytes = 29.78% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 86682 bytes Input file size = 86880 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 63247 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 63247 Output IDAT size = 63247 bytes (23435 bytes decrease) Output file size = 63325 bytes (23555 bytes = 27.11% decrease) --- finished re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmatime-overview.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 91930 bytes Input file size = 92140 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66765 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66765 Output IDAT size = 66765 bytes (25165 bytes decrease) Output file size = 66843 bytes (25297 bytes = 27.45% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 20301 bytes Input file size = 20403 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17131 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17131 Output IDAT size = 17131 bytes (3170 bytes decrease) Output file size = 17209 bytes (3194 bytes = 15.65% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 55365 bytes Input file size = 55515 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39379 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39379 Output IDAT size = 39379 bytes (15986 bytes decrease) Output file size = 39457 bytes (16058 bytes = 28.93% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 81727 bytes Input file size = 81913 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62030 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62030 Output IDAT size = 62030 bytes (19697 bytes decrease) Output file size = 62108 bytes (19805 bytes = 24.18% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 67131 bytes Input file size = 67305 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53203 Output IDAT size = 53203 bytes (13928 bytes decrease) Output file size = 53281 bytes (14024 bytes = 20.84% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31391 bytes Input file size = 31505 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23935 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23935 Output IDAT size = 23935 bytes (7456 bytes decrease) Output file size = 24013 bytes (7492 bytes = 23.78% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 75825 bytes Input file size = 76011 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 59113 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 59113 Output IDAT size = 59113 bytes (16712 bytes decrease) Output file size = 59191 bytes (16820 bytes = 22.13% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 55836 bytes Input file size = 55986 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42146 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42146 Output IDAT size = 42146 bytes (13690 bytes decrease) Output file size = 42224 bytes (13762 bytes = 24.58% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd) Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmatime-2.Rmd’ SUMMARY: processing the following file failed: ‘runmbnmatime-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'consistencychecking-3.Rmd' using rmarkdown --- finished re-building 'consistencychecking-3.Rmd' --- re-building 'dataexploration-1.Rmd' using rmarkdown --- finished re-building 'dataexploration-1.Rmd' --- re-building 'mbnmatime-overview.Rmd' using rmarkdown --- finished re-building 'mbnmatime-overview.Rmd' --- re-building 'outputs-4.Rmd' using rmarkdown --- finished re-building 'outputs-4.Rmd' --- re-building 'predictions-5.Rmd' using rmarkdown --- finished re-building 'predictions-5.Rmd' --- re-building 'runmbnmatime-2.Rmd' using rmarkdown Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd) Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building 'runmbnmatime-2.Rmd' SUMMARY: processing the following file failed: 'runmbnmatime-2.Rmd' Error: Vignette re-building failed. Execution halted Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19052 bytes Input file size = 19154 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 Output IDAT size = 14912 bytes (4140 bytes decrease) Output file size = 14990 bytes (4164 bytes = 21.74% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33676 bytes Input file size = 33802 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 Output IDAT size = 26019 bytes (7657 bytes decrease) Output file size = 26097 bytes (7705 bytes = 22.79% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31267 bytes Input file size = 31381 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 Output IDAT size = 25404 bytes (5863 bytes decrease) Output file size = 25482 bytes (5899 bytes = 18.80% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19072 bytes Input file size = 19174 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 Output IDAT size = 16320 bytes (2752 bytes decrease) Output file size = 16398 bytes (2776 bytes = 14.48% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 119981 bytes Input file size = 120227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 Output IDAT size = 88771 bytes (31210 bytes decrease) Output file size = 88849 bytes (31378 bytes = 26.10% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25739 bytes Input file size = 25853 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 Output IDAT size = 19919 bytes (5820 bytes decrease) Output file size = 19997 bytes (5856 bytes = 22.65% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 131032 bytes Input file size = 131290 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 Output IDAT size = 94428 bytes (36604 bytes decrease) Output file size = 94506 bytes (36784 bytes = 28.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 79747 bytes Input file size = 79933 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 Output IDAT size = 57953 bytes (21794 bytes decrease) Output file size = 58031 bytes (21902 bytes = 27.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 64122 bytes Input file size = 64284 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 Output IDAT size = 45061 bytes (19061 bytes decrease) Output file size = 45139 bytes (19145 bytes = 29.78% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 88995 bytes Input file size = 89193 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66126 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66126 Output IDAT size = 66126 bytes (22869 bytes decrease) Output file size = 66204 bytes (22989 bytes = 25.77% decrease) --- finished re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmatime-overview.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 91692 bytes Input file size = 91902 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66588 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66588 Output IDAT size = 66588 bytes (25104 bytes decrease) Output file size = 66666 bytes (25236 bytes = 27.46% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 20450 bytes Input file size = 20552 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17124 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17124 Output IDAT size = 17124 bytes (3326 bytes decrease) Output file size = 17202 bytes (3350 bytes = 16.30% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 57953 bytes Input file size = 58115 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41528 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41528 Output IDAT size = 41528 bytes (16425 bytes decrease) Output file size = 41606 bytes (16509 bytes = 28.41% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 81729 bytes Input file size = 81915 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61938 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61938 Output IDAT size = 61938 bytes (19791 bytes decrease) Output file size = 62016 bytes (19899 bytes = 24.29% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 67346 bytes Input file size = 67520 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53133 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53133 Output IDAT size = 53133 bytes (14213 bytes decrease) Output file size = 53211 bytes (14309 bytes = 21.19% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31325 bytes Input file size = 31439 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24272 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24272 Output IDAT size = 24272 bytes (7053 bytes decrease) Output file size = 24350 bytes (7089 bytes = 22.55% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 75223 bytes Input file size = 75409 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58266 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58266 Output IDAT size = 58266 bytes (16957 bytes decrease) Output file size = 58344 bytes (17065 bytes = 22.63% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 57149 bytes Input file size = 57299 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43303 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43303 Output IDAT size = 43303 bytes (13846 bytes decrease) Output file size = 43381 bytes (13918 bytes = 24.29% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd) Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmatime-2.Rmd’ SUMMARY: processing the following file failed: ‘runmbnmatime-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64

Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19052 bytes Input file size = 19154 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912 Output IDAT size = 14912 bytes (4140 bytes decrease) Output file size = 14990 bytes (4164 bytes = 21.74% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png 672x240 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33676 bytes Input file size = 33802 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019 Output IDAT size = 26019 bytes (7657 bytes decrease) Output file size = 26097 bytes (7705 bytes = 22.79% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31267 bytes Input file size = 31381 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404 Output IDAT size = 25404 bytes (5863 bytes decrease) Output file size = 25482 bytes (5899 bytes = 18.80% decrease) --- finished re-building ‘consistencychecking-3.Rmd’ --- re-building ‘dataexploration-1.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19072 bytes Input file size = 19174 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320 Output IDAT size = 16320 bytes (2752 bytes decrease) Output file size = 16398 bytes (2776 bytes = 14.48% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 119981 bytes Input file size = 120227 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771 Output IDAT size = 88771 bytes (31210 bytes decrease) Output file size = 88849 bytes (31378 bytes = 26.10% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25739 bytes Input file size = 25853 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919 Output IDAT size = 19919 bytes (5820 bytes decrease) Output file size = 19997 bytes (5856 bytes = 22.65% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 131032 bytes Input file size = 131290 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428 Output IDAT size = 94428 bytes (36604 bytes decrease) Output file size = 94506 bytes (36784 bytes = 28.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 79747 bytes Input file size = 79933 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953 Output IDAT size = 57953 bytes (21794 bytes decrease) Output file size = 58031 bytes (21902 bytes = 27.40% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 64122 bytes Input file size = 64284 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061 Output IDAT size = 45061 bytes (19061 bytes decrease) Output file size = 45139 bytes (19145 bytes = 29.78% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 87907 bytes Input file size = 88105 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66422 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66422 Output IDAT size = 66422 bytes (21485 bytes decrease) Output file size = 66500 bytes (21605 bytes = 24.52% decrease) --- finished re-building ‘dataexploration-1.Rmd’ --- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown --- finished re-building ‘mbnmatime-overview.Rmd’ --- re-building ‘outputs-4.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 91971 bytes Input file size = 92181 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66313 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66313 Output IDAT size = 66313 bytes (25658 bytes decrease) Output file size = 66391 bytes (25790 bytes = 27.98% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 21208 bytes Input file size = 21310 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17650 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17650 Output IDAT size = 17650 bytes (3558 bytes decrease) Output file size = 17728 bytes (3582 bytes = 16.81% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 60583 bytes Input file size = 60745 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43783 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43783 Output IDAT size = 43783 bytes (16800 bytes decrease) Output file size = 43861 bytes (16884 bytes = 27.79% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 81664 bytes Input file size = 81850 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61958 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61958 Output IDAT size = 61958 bytes (19706 bytes decrease) Output file size = 62036 bytes (19814 bytes = 24.21% decrease) --- finished re-building ‘outputs-4.Rmd’ --- re-building ‘predictions-5.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 67201 bytes Input file size = 67375 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53086 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53086 Output IDAT size = 53086 bytes (14115 bytes decrease) Output file size = 53164 bytes (14211 bytes = 21.09% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31213 bytes Input file size = 31327 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24100 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24100 Output IDAT size = 24100 bytes (7113 bytes decrease) Output file size = 24178 bytes (7149 bytes = 22.82% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 74801 bytes Input file size = 74987 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57734 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57734 Output IDAT size = 57734 bytes (17067 bytes decrease) Output file size = 57812 bytes (17175 bytes = 22.90% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 54786 bytes Input file size = 54936 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40863 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40863 Output IDAT size = 40863 bytes (13923 bytes decrease) Output file size = 40941 bytes (13995 bytes = 25.48% decrease) --- finished re-building ‘predictions-5.Rmd’ --- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd) Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building ‘runmbnmatime-2.Rmd’ SUMMARY: processing the following file failed: ‘runmbnmatime-2.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64